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  5. LOC_Os03g05390.6

LOC_Os03g05390.6 (LOC_Os03g05390)


Aliases : LOC_Os03g05390

Description : putative silicon efflux transporter (LSI2)


Gene families : OG0000879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000879_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g05390.6
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Adi_g020566 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Aev_g26527 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Aop_g43675 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g02613 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Ceric.13G017100.1 Ceric.13G017100 putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Dac_g24982 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g39944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g28976 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g04846 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
MA_10272693g0010 No alias Silicon efflux transporter LSI3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
MA_133755g0010 No alias putative silicon efflux transporter (LSI2) 0.03 OrthoFinder output from all 47 species
Ore_g26561 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g13706 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g015985 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Spa_g44746 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e000055_P001 Zm00001e000055 putative silicon efflux transporter (LSI2) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0009916 alternative oxidase activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR004680 Cit_transptr-like_dom 29 502
No external refs found!