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  5. LOC_Os03g04930.1

LOC_Os03g04930.1 (LOC_Os03g04930)


Aliases : LOC_Os03g04930

Description : no hits & (original description: none)


Gene families : OG0002617 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002617_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g04930.1

Target Alias Description ECC score Gene Family Method Actions
AT3G04350 No alias Plant protein of unknown function (DUF946) 0.02 OrthoFinder output from all 47 species
AT5G18490 No alias Plant protein of unknown function (DUF946) 0.04 OrthoFinder output from all 47 species
Ceric.08G004200.1 Ceric.08G004200 not classified & original description: pacid=50638913... 0.02 OrthoFinder output from all 47 species
GSVIVT01023394001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_30277 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g51150.1 LOC_Os03g51150 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g38840.1 LOC_Os07g38840 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_101930g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_477653g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Smo231324 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc01g081620.3.1 Solyc01g081620 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc04g050140.3.1 Solyc04g050140 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc05g055910.4.1 Solyc05g055910 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc10g045380.2.1 Solyc10g045380 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g01073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000346_P001 Zm00001e000346 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR009291 Vps62 22 546
No external refs found!