LOC_Os02g02360.1


Description : NOB1 pre-rRNA processing endonuclease involved in ITS1 rRNA removal. endonuclease (NOB1)


Gene families : OG_01_0004736 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004736_tree ,
OG_02_0005067 (LandPlants) Phylogenetic Tree(s): OG_02_0005067_tree ,
OG_03_0005489 (SeedPlants) Phylogenetic Tree(s): OG_03_0005489_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g02360.1
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00064100 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 Archaeplastida
AT5G41190 No alias CONTAINS InterPro DOMAIN/s: Nin one binding (NOB1)... 0.07 Archaeplastida
Cpa|evm.model.tig00020964.11 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 Archaeplastida
Cre01.g031750 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.12 Archaeplastida
GSVIVT01019776001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.12 Archaeplastida
Gb_33378 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.05 Archaeplastida
Mp1g16460.1 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.08 Archaeplastida
Pp3c2_34320V3.1 No alias No annotation 0.07 Archaeplastida
Solyc08g007990.3.1 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.06 Archaeplastida
Zm00001e013450_P001 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.02 Archaeplastida
Zm00001e025376_P003 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.06 Archaeplastida
AMTR_s00110p00064100 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 LandPlants
AT5G41190 No alias CONTAINS InterPro DOMAIN/s: Nin one binding (NOB1)... 0.07 LandPlants
GSVIVT01019776001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.1 LandPlants
Gb_33378 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.05 LandPlants
Mp1g16460.1 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.07 LandPlants
Pp3c2_34320V3.1 No alias No annotation 0.07 LandPlants
Solyc08g007990.3.1 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.06 LandPlants
Zm00001e013450_P001 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.02 LandPlants
Zm00001e025376_P003 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.06 LandPlants
AMTR_s00110p00064100 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 SeedPlants
AT5G41190 No alias CONTAINS InterPro DOMAIN/s: Nin one binding (NOB1)... 0.07 SeedPlants
GSVIVT01019776001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.1 SeedPlants
Gb_33378 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.05 SeedPlants
Solyc08g007990.3.1 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.06 SeedPlants
Zm00001e013450_P001 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.02 SeedPlants
Zm00001e025376_P003 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.06 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR033411 Ribonuclease_PIN 64 150
IPR014881 NOB1_Zn-bd 428 498
No external refs found!