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  5. LOC_Os02g02360.1

LOC_Os02g02360.1


Description : NOB1 pre-rRNA processing endonuclease involved in ITS1 rRNA removal. endonuclease (NOB1)


Gene families : OG_01_0004736 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004736_tree ,
OG_02_0005067 (LandPlants) Phylogenetic Tree(s): OG_02_0005067_tree ,
OG_03_0005489 (SeedPlants) Phylogenetic Tree(s): OG_03_0005489_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g02360.1
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00064100 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 Archaeplastida
AT5G41190 No alias CONTAINS InterPro DOMAIN/s: Nin one binding (NOB1)... 0.07 Archaeplastida
Cpa|evm.model.tig00020964.11 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 Archaeplastida
Cre01.g031750 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.12 Archaeplastida
GSVIVT01019776001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.12 Archaeplastida
Gb_33378 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.05 Archaeplastida
Mp1g16460.1 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.08 Archaeplastida
Pp3c2_34320V3.1 No alias No annotation 0.07 Archaeplastida
Solyc08g007990.3.1 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.06 Archaeplastida
Zm00001e013450_P001 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.02 Archaeplastida
Zm00001e025376_P003 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.06 Archaeplastida
AMTR_s00110p00064100 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 LandPlants
AT5G41190 No alias CONTAINS InterPro DOMAIN/s: Nin one binding (NOB1)... 0.07 LandPlants
GSVIVT01019776001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.1 LandPlants
Gb_33378 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.05 LandPlants
Mp1g16460.1 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.07 LandPlants
Pp3c2_34320V3.1 No alias No annotation 0.07 LandPlants
Solyc08g007990.3.1 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.06 LandPlants
Zm00001e013450_P001 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.02 LandPlants
Zm00001e025376_P003 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.06 LandPlants
AMTR_s00110p00064100 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 SeedPlants
AT5G41190 No alias CONTAINS InterPro DOMAIN/s: Nin one binding (NOB1)... 0.07 SeedPlants
GSVIVT01019776001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.1 SeedPlants
Gb_33378 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.05 SeedPlants
Solyc08g007990.3.1 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.06 SeedPlants
Zm00001e013450_P001 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.02 SeedPlants
Zm00001e025376_P003 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.06 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR033411 Ribonuclease_PIN 64 150
IPR014881 NOB1_Zn-bd 428 498
No external refs found!