Aliases : CPSRP43, CAO, LOC_Os03g03990
Description : component cpSRP43 of thylakoid membrane SRP insertion system
Gene families : OG0007162 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007162_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os03g03990.1 | |
Cluster | HCCA: Cluster_59 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00001p00270240 | CPSRP43, CAO,... | Protein translocation.chloroplast.thylakoid membrane SRP... | 0.07 | OrthoFinder output from all 47 species | |
AT2G47450 | CPSRP43, CAO | chloroplast signal recognition particle component (CAO) | 0.09 | OrthoFinder output from all 47 species | |
Adi_g113205 | CPSRP43, CAO | component *(cpSRP43) of thylakoid membrane SRP insertion... | 0.04 | OrthoFinder output from all 47 species | |
Aev_g05408 | CPSRP43, CAO | component *(cpSRP43) of thylakoid membrane SRP insertion... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.38G054000.1 | CPSRP43, CAO,... | component *(cpSRP43) of thylakoid membrane SRP insertion... | 0.06 | OrthoFinder output from all 47 species | |
Cre04.g231026 | CPSRP43, CAO | Protein translocation.chloroplast.thylakoid membrane SRP... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g39238 | CPSRP43, CAO | component *(cpSRP43) of thylakoid membrane SRP insertion... | 0.07 | OrthoFinder output from all 47 species | |
Len_g16711 | CPSRP43, CAO | component *(cpSRP43) of thylakoid membrane SRP insertion... | 0.06 | OrthoFinder output from all 47 species | |
MA_845170g0010 | No alias | component cpSRP43 of thylakoid membrane SRP insertion system | 0.04 | OrthoFinder output from all 47 species | |
Mp2g09760.1 | CPSRP43, CAO | component cpSRP43 of thylakoid membrane SRP insertion system | 0.04 | OrthoFinder output from all 47 species | |
Msp_g12207 | CPSRP43, CAO | component *(cpSRP43) of thylakoid membrane SRP insertion... | 0.04 | OrthoFinder output from all 47 species | |
Ore_g21609 | CPSRP43, CAO | component *(cpSRP43) of thylakoid membrane SRP insertion... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g41563 | CPSRP43, CAO | component *(cpSRP43) of thylakoid membrane SRP insertion... | 0.08 | OrthoFinder output from all 47 species | |
Smo270723 | CPSRP43, CAO | Protein translocation.chloroplast.thylakoid membrane SRP... | 0.06 | OrthoFinder output from all 47 species | |
Solyc02g087400.1.1 | CPSRP43, CAO,... | component cpSRP43 of thylakoid membrane SRP insertion system | 0.1 | OrthoFinder output from all 47 species | |
Spa_g13003 | CPSRP43, CAO | component *(cpSRP43) of thylakoid membrane SRP insertion... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g03919 | CPSRP43, CAO | component *(cpSRP43) of thylakoid membrane SRP insertion... | 0.06 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0003924 | GTPase activity | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | HCCA |
BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0008171 | O-methyltransferase activity | IEP | HCCA |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
CC | GO:0009521 | photosystem | IEP | HCCA |
CC | GO:0009523 | photosystem II | IEP | HCCA |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0015979 | photosynthesis | IEP | HCCA |
BP | GO:0015994 | chlorophyll metabolic process | IEP | HCCA |
BP | GO:0015995 | chlorophyll biosynthetic process | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0042440 | pigment metabolic process | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:0046148 | pigment biosynthetic process | IEP | HCCA |
MF | GO:0046406 | magnesium protoporphyrin IX methyltransferase activity | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
CC | GO:0098796 | membrane protein complex | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
CC | GO:1902494 | catalytic complex | IEP | HCCA |
CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR023780 | Chromo_domain | 323 | 370 |
No external refs found! |