LOC_Os03g03949.2 (LOC_Os03g03949)


Aliases : LOC_Os03g03949

Description : LTO1 protein involved in PS-II assembly. thiol-disulfide oxidoreductase (LTO1)


Gene families : OG0004555 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004555_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g03949.2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00178450 evm_27.TU.AmTr_v1... Protein modification.disulfide bond... 0.06 OrthoFinder output from all 47 species
AT4G35760 No alias NAD(P)H dehydrogenase (quinone)s 0.06 OrthoFinder output from all 47 species
Adi_g056119 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.02 OrthoFinder output from all 47 species
Aev_g06675 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.05 OrthoFinder output from all 47 species
Ala_g09310 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.03 OrthoFinder output from all 47 species
Als_g16128 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.02 OrthoFinder output from all 47 species
Aob_g03219 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene70714.t1 Aspi01Gene70714 thiol-disulfide oxidoreductase *(LTO1) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010185 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.04 OrthoFinder output from all 47 species
Ceric.12G007300.1 Ceric.12G007300 thiol-disulfide oxidoreductase *(LTO1) & original... 0.06 OrthoFinder output from all 47 species
Cre12.g493150 No alias Protein modification.disulfide bond... 0.01 OrthoFinder output from all 47 species
Dac_g11430 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g19068 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.04 OrthoFinder output from all 47 species
Dde_g01392 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g10583 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.05 OrthoFinder output from all 47 species
Gb_11132 No alias LTO1 protein involved in PS-II assembly. thiol-disulfide... 0.03 OrthoFinder output from all 47 species
MA_10432388g0010 No alias LTO1 protein involved in PS-II assembly. thiol-disulfide... 0.03 OrthoFinder output from all 47 species
Mp2g11540.1 No alias LTO1 protein involved in PS-II assembly. thiol-disulfide... 0.07 OrthoFinder output from all 47 species
Msp_g04590 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g00604 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.03 OrthoFinder output from all 47 species
Ore_g07405 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.04 OrthoFinder output from all 47 species
Pir_g09423 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0161.g023911 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.03 OrthoFinder output from all 47 species
Solyc02g083270.4.1 Solyc02g083270 LTO1 protein involved in PS-II assembly. thiol-disulfide... 0.03 OrthoFinder output from all 47 species
Zm00001e000262_P003 Zm00001e000262 LTO1 protein involved in PS-II assembly. thiol-disulfide... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR012932 VKOR 84 211
No external refs found!