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  5. LOC_Os03g03810.1

LOC_Os03g03810.1 (LOC_Os03g03810)


Aliases : LOC_Os03g03810

Description : defensin (PDF2)


Gene families : OG0007968 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007968_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g03810.1
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT2G02100 LCR69, PDF2.2 low-molecular-weight cysteine-rich 69 0.03 OrthoFinder output from all 47 species
AT2G02120 PDF2.1, LCR70 Scorpion toxin-like knottin superfamily protein 0.03 OrthoFinder output from all 47 species
GSVIVT01010274001 No alias Defensin-like protein OS=Petunia integrifolia 0.03 OrthoFinder output from all 47 species
Gb_21864 No alias defensin (PDF2) 0.03 OrthoFinder output from all 47 species
Solyc04g072470.4.1 Solyc04g072470 defensin (PDF2) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!