LOC_Os03g03020.1 (PRPL11, LOC_Os03g03020)

Aliases : PRPL11, LOC_Os03g03020

Description : component psRPL11 of large ribosomal subunit proteome

Gene families : OG0007074 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007074_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g03020.1
Cluster	HCCA: Cluster_59

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00272010	PRPL11,...	Protein biosynthesis.organelle translation...	0.02	OrthoFinder output from all 47 species
AT1G32990	PRPL11	plastid ribosomal protein l11	0.27	OrthoFinder output from all 47 species
Adi_g019225	PRPL11	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g24656	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Ala_g12058	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Als_g00538	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.06	OrthoFinder output from all 47 species
Aob_g13607	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.1	OrthoFinder output from all 47 species
Aop_g01017	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.06	OrthoFinder output from all 47 species
Aspi01Gene51098.t1	PRPL11, Aspi01Gene51098	component *(uL11c) of large plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Azfi_s0591.g078746	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.13	OrthoFinder output from all 47 species
Cba_g10687	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Ceric.03G039700.1	PRPL11, Ceric.03G039700	component *(uL11c) of large plastid ribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Cre10.g423650	PRPL11	Protein biosynthesis.organelle translation...	0.18	OrthoFinder output from all 47 species
Dac_g28507	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Dde_g08872	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.06	OrthoFinder output from all 47 species
Ehy_g02085	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
GSVIVT01019689001	PRPL11	Protein biosynthesis.organelle translation...	0.19	OrthoFinder output from all 47 species
Gb_12514	PRPL11	component psRPL11 of large ribosomal subunit proteome	0.17	OrthoFinder output from all 47 species
Len_g25437	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Lfl_g13039	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
MA_26087g0010	PRPL11	50S ribosomal protein L11, chloroplastic OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
MA_368887g0010	PRPL11	50S ribosomal protein L11, chloroplastic OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Mp7g12110.1	PRPL11	component psRPL11 of large ribosomal subunit proteome	0.31	OrthoFinder output from all 47 species
Nbi_g11504	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.1	OrthoFinder output from all 47 species
Pir_g17849	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Pp3c10_12450V3.1	PRPL11, Pp3c10_12450	plastid ribosomal protein l11	0.08	OrthoFinder output from all 47 species
Pp3c12_19370V3.1	PRPL11, Pp3c12_19370	plastid ribosomal protein l11	0.07	OrthoFinder output from all 47 species
Pp3c3_20370V3.1	PRPL11, Pp3c3_20370	plastid ribosomal protein l11	0.07	OrthoFinder output from all 47 species
Sacu_v1.1_s0122.g021434	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.13	OrthoFinder output from all 47 species
Sam_g06585	No alias	component *(uL11c) of large plastid ribosomal-subunit...	0.16	OrthoFinder output from all 47 species
Solyc08g083350.4.1	PRPL11, Solyc08g083350	component psRPL11 of large ribosomal subunit proteome	0.25	OrthoFinder output from all 47 species
Spa_g16220	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.16	OrthoFinder output from all 47 species
Tin_g17431	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.1	OrthoFinder output from all 47 species
Zm00001e000163_P001	PRPL11, Zm00001e000163	component psRPL11 of large ribosomal subunit proteome	0.34	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
MF	GO:0004418	hydroxymethylbilane synthase activity	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006414	translational elongation	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR020784	Ribosomal_L11_N	60	124
IPR020783	Ribosomal_L11_C	129	197

External Links

No external refs found!

LOC_Os03g03020.1 (PRPL11, LOC_Os03g03020)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation