LOC_Os03g01710.1 (LOC_Os03g01710)


Aliases : LOC_Os03g01710

Description : no hits & (original description: none)


Gene families : OG0000964 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000964_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g01710.1
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00257000 evm_27.TU.AmTr_v1... COP1-interactive protein 1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00010p00223040 evm_27.TU.AmTr_v1... COP1-interactive protein 1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT1G22060 No alias LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures;... 0.08 OrthoFinder output from all 47 species
AT5G41140 No alias Myosin heavy chain-related protein 0.17 OrthoFinder output from all 47 species
AT5G52280 No alias Myosin heavy chain-related protein 0.05 OrthoFinder output from all 47 species
Adi_g011579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17663 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05141 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g33047 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08140 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0015.g014174 No alias not classified & original description: CDS=345-4727 0.02 OrthoFinder output from all 47 species
Dcu_g15928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08669 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g18793 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008970001 No alias No description available 0.08 OrthoFinder output from all 47 species
GSVIVT01008971001 No alias No description available 0.08 OrthoFinder output from all 47 species
GSVIVT01019782001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01028978001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_26931 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_27516 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Len_g08370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03505 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10431386g0010 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
MA_10437003g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_9751268g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Nbi_g04466 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08920 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018217 No alias not classified & original description: CDS=840-4208 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0204.g025686 No alias not classified & original description: CDS=1028-3349 0.02 OrthoFinder output from all 47 species
Smo425588 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc03g025830.4.1 Solyc03g025830 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc04g072630.4.1 Solyc04g072630 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc08g080780.4.1 Solyc08g080780 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Spa_g04859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06177 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004411_P002 Zm00001e004411 no hits & (original description: none) 0.19 OrthoFinder output from all 47 species
Zm00001e012583_P001 Zm00001e012583 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
Zm00001e018560_P002 Zm00001e018560 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e037927_P004 Zm00001e037927 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!