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  5. LOC_Os03g01700.1

LOC_Os03g01700.1 (LOC_Os03g01700)


Aliases : LOC_Os03g01700

Description : putative silicon efflux transporter (LSI2)


Gene families : OG0000879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000879_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g01700.1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00226220 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.IT... 0.02 OrthoFinder output from all 47 species
AMTR_s00168p00064780 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Adi_g056338 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Adi_g056339 No alias putative silicon efflux transporter *(LSI2) & original... 0.06 OrthoFinder output from all 47 species
Aev_g16129 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Aev_g26527 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Ala_g28215 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Als_g37588 No alias putative silicon efflux transporter *(LSI2) & original... 0.06 OrthoFinder output from all 47 species
Aob_g26379 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Aop_g04633 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Aop_g18611 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Aop_g30007 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Aop_g36107 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene09602.t1 Aspi01Gene09602 putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene25042.t1 Aspi01Gene25042 putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene32904.t1 Aspi01Gene32904 putative silicon efflux transporter *(LSI2) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene32907.t1 Aspi01Gene32907 putative silicon efflux transporter *(LSI2) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene32908.t1 Aspi01Gene32908 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32932.t2 Aspi01Gene32932 putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Cba_g05358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07480 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Cba_g38733 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Ceric.07G021700.1 Ceric.07G021700 putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Ceric.13G016900.1 Ceric.13G016900 putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Ceric.13G017100.1 Ceric.13G017100 putative silicon efflux transporter *(LSI2) & original... 0.05 OrthoFinder output from all 47 species
Dac_g14147 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Dac_g24982 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g30291 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g45721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g13476 No alias putative silicon efflux transporter *(LSI2) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g41359 No alias putative silicon efflux transporter *(LSI2) & original... 0.09 OrthoFinder output from all 47 species
Dde_g13050 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g04848 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g04849 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g06951 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g11019 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g28975 No alias putative silicon efflux transporter *(LSI2) & original... 0.07 OrthoFinder output from all 47 species
Ehy_g28976 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01019733001 No alias Solute transport.carrier-mediated transport.IT... 0.03 OrthoFinder output from all 47 species
LOC_Os02g57620.1 LOC_Os02g57620 putative silicon efflux transporter (LSI2) 0.03 OrthoFinder output from all 47 species
LOC_Os10g39980.1 LOC_Os10g39980 putative silicon efflux transporter (LSI2) 0.08 OrthoFinder output from all 47 species
Len_g22138 No alias putative silicon efflux transporter *(LSI2) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g03365 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g04846 No alias putative silicon efflux transporter *(LSI2) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g10667 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Mp1g14840.1 No alias putative silicon efflux transporter (LSI2) 0.01 OrthoFinder output from all 47 species
Msp_g42191 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g48184 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Ore_g14643 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Pir_g18683 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g13706 No alias putative silicon efflux transporter *(LSI2) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006251 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g015985 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018482 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Smo148775 No alias Solute transport.carrier-mediated transport.IT... 0.03 OrthoFinder output from all 47 species
Smo98013 No alias Solute transport.carrier-mediated transport.IT... 0.05 OrthoFinder output from all 47 species
Solyc03g025350.3.1 Solyc03g025350 putative silicon efflux transporter (LSI2) 0.02 OrthoFinder output from all 47 species
Solyc06g036100.3.1 Solyc06g036100 putative silicon efflux transporter (LSI2) 0.01 OrthoFinder output from all 47 species
Spa_g11339 No alias putative silicon efflux transporter *(LSI2) & original... 0.05 OrthoFinder output from all 47 species
Spa_g42152 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g47287 No alias putative silicon efflux transporter *(LSI2) & original... 0.01 OrthoFinder output from all 47 species
Zm00001e000055_P001 Zm00001e000055 putative silicon efflux transporter (LSI2) 0.1 OrthoFinder output from all 47 species
Zm00001e002282_P001 Zm00001e002282 putative silicon efflux transporter (LSI2) 0.11 OrthoFinder output from all 47 species
Zm00001e023569_P001 Zm00001e023569 putative silicon efflux transporter (LSI2) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0120009 intermembrane lipid transfer IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
InterPro domains Description Start Stop
IPR004680 Cit_transptr-like_dom 20 417
No external refs found!