- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : LOC_Os02g58440
Description : C3H zinc finger transcription factor. regulatory component ZC11A of TREX/THO mRNP trafficking complex
Gene families : OG0001116 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001116_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os02g58440.1 | |
| Cluster | HCCA: Cluster_56 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g039725 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g059322 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g067444 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g35518 | No alias | regulatory protein *(ZC11A) of mRNA export & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g21805 | No alias | regulatory protein *(ZC11A) of mRNA export & original... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g13222 | No alias | regulatory protein *(ZC11A) of mRNA export & original... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g04919 | No alias | regulatory protein *(ZC11A) of mRNA export & original... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005215 | transporter activity | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
| MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR041686 | Znf-CCCH_3 | 17 | 70 |
| No external refs found! |