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  5. LOC_Os02g58220.1

LOC_Os02g58220.1 (ATRPA2, ATRPA32A,...)


Aliases : ATRPA2, ATRPA32A, RPA2, ROR1, RPA32A, LOC_Os02g58220

Description : component RPA2 of single-stranded-DNA binding RPA complex. component RPA2 of RPA presynaptic filament assembly factor complex


Gene families : OG0003036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g58220.1

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0074.g037483 ATRPA32B, RPA32B component *(RPA2) of RPA presynaptic filament assembly... 0.03 OrthoFinder output from all 47 species
Ceric.28G042500.1 ATRPA32B,... component *(RPA2) of RPA presynaptic filament assembly... 0.03 OrthoFinder output from all 47 species
GSVIVT01035537001 ATRPA2,... Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.03 OrthoFinder output from all 47 species
Gb_15876 ATRPA32B, RPA32B component RPA2 of single-stranded-DNA binding RPA... 0.03 OrthoFinder output from all 47 species
Mp5g22240.1 ATRPA32B, RPA32B component RPA2 of single-stranded-DNA binding RPA... 0.04 OrthoFinder output from all 47 species
Solyc07g018300.3.1 ATRPA2,... component RPA2 of single-stranded-DNA binding RPA... 0.02 OrthoFinder output from all 47 species
Spa_g07704 ATRPA32B, RPA32B component *(RPA2) of RPA presynaptic filament assembly... 0.02 OrthoFinder output from all 47 species
Spa_g07705 ATRPA32B, RPA32B component *(RPA2) of RPA presynaptic filament assembly... 0.03 OrthoFinder output from all 47 species
Spa_g07706 ATRPA32B, RPA32B component *(RPA2) of RPA presynaptic filament assembly... 0.07 OrthoFinder output from all 47 species
Zm00001e016275_P001 ATRPA2,... component RPA2 of single-stranded-DNA binding RPA... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR014892 RPA_C 162 270
No external refs found!