1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os02g57150.1

LOC_Os02g57150.1 (TFCA, KIS, LOC_Os02g57150)


Aliases : TFCA, KIS, LOC_Os02g57150

Description : TFC-A cofactor of post-CCT Tubulin folding pathway


Gene families : OG0003679 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003679_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g57150.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g010301 TFCA, KIS cofactor of post-CCT Tubulin folding pathway *(TFC-A) &... 0.02 OrthoFinder output from all 47 species
Cba_g23880 TFCA, KIS cofactor of post-CCT Tubulin folding pathway *(TFC-A) &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001001.10 No alias Cytoskeleton.actin and tubulin folding.post-CCT Tubulin... 0.02 OrthoFinder output from all 47 species
Ehy_g15000 TFCA, KIS cofactor of post-CCT Tubulin folding pathway *(TFC-A) &... 0.02 OrthoFinder output from all 47 species
Lfl_g18147 TFCA, KIS cofactor of post-CCT Tubulin folding pathway *(TFC-A) &... 0.02 OrthoFinder output from all 47 species
MA_10427516g0010 TFCA, KIS TFC-A cofactor of post-CCT Tubulin folding pathway 0.05 OrthoFinder output from all 47 species
Pp3c15_6440V3.1 TFCA, KIS, Pp3c15_6440 tubulin folding cofactor A (KIESEL) 0.02 OrthoFinder output from all 47 species
Spa_g02442 TFCA, KIS cofactor of post-CCT Tubulin folding pathway *(TFC-A) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007021 tubulin complex assembly IEA Interproscan
BP GO:0007023 post-chaperonin tubulin folding pathway IEA Interproscan
MF GO:0048487 beta-tubulin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004226 TBCA 7 89
No external refs found!