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  5. LOC_Os02g56810.1

LOC_Os02g56810.1 (AtPP2-B2, PP2-B2,...)


Aliases : AtPP2-B2, PP2-B2, LOC_Os02g56810

Description : no hits & (original description: none)


Gene families : OG0000279 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000279_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g56810.1
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00203100 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G56250 PP2-B14, AtPP2-B14 phloem protein 2-B14 0.06 OrthoFinder output from all 47 species
AT4G19840 PP2-A1,... phloem protein 2-A1 0.02 OrthoFinder output from all 47 species
AT4G19850 ATPP2-A2, PP2-A2, PP2A2 lectin-related 0.04 OrthoFinder output from all 47 species
AT5G24560 AtPP2-B12, PP2-B12 phloem protein 2-B12 0.03 OrthoFinder output from all 47 species
Aev_g48312 PP2-A15, AtPP2-A15 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04871 AtPP2-B7, PP2-B7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12006 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g24739 AtPP2-B9, SKIP3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g25309 PP2-A1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55185.t1 MEE66, Aspi01Gene55185 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55186.t1 AtPP2-B8,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55189.t2 ATPP2-A4,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0322.g064518 No alias not classified & original description: CDS=191-1105 0.03 OrthoFinder output from all 47 species
Azfi_s0322.g064522 No alias not classified & original description: CDS=100-843 0.02 OrthoFinder output from all 47 species
Azfi_s0322.g064524 No alias not classified & original description: CDS=1-477 0.03 OrthoFinder output from all 47 species
Azfi_s2399.g111181 No alias not classified & original description: CDS=192-1106 0.04 OrthoFinder output from all 47 species
Cba_g38846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.31G022200.1 Ceric.31G022200 not classified & original description: pacid=50575041... 0.02 OrthoFinder output from all 47 species
Dac_g08840 AtPP2-B8, PP2-B8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003897001 AtPP2-B10, PP2-B10 F-box protein At2g02240 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os02g56800.1 AtPP2-B2,... Putative F-box protein PP2-B2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os12g03740.1 AtPP2-B10,... F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Lfl_g25665 MEE66 not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_22084g0010 MEE66 F-box protein At2g02240 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g04570 MEE66 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g08804 AtPP2-B8, PP2-B8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g11862 PP2-A11, AtPP2-A11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25366 AtPP2-B12, PP2-B12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g26057 AtPP2-B1, PP2-B1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g38746 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g100010.3.1 PP2-B15,... F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc02g069020.3.1 PP2-A1,... Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc04g050990.3.1 MEE66, Solyc04g050990 F-box protein At2g02240 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc12g096890.1.1 AtPP2-B10,... F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g17453 AtPP2-A13, PP2-A13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g25603 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13563 MEE66 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e034748_P001 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.04 OrthoFinder output from all 47 species
Zm00001e040260_P002 AtPP2-B2,... Putative F-box protein PP2-B2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e041427_P001 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
InterPro domains Description Start Stop
IPR025886 PP2-like 95 190
No external refs found!