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  5. LOC_Os02g56280.1

LOC_Os02g56280.1 (LOC_Os02g56280)


Aliases : LOC_Os02g56280

Description : E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana (sp|q9lta6|wav3_arath : 211.0)


Gene families : OG0000599 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000599_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g56280.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g021972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15195 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0206.g057816 No alias not classified & original description: CDS=364-2808 0.04 OrthoFinder output from all 47 species
MA_129331g0010 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0137.g022462 No alias not classified & original description: CDS=13-2373 0.02 OrthoFinder output from all 47 species
Solyc04g076860.3.1 Solyc04g076860 ubiquitin protein ligase (WAV3) 0.03 OrthoFinder output from all 47 species
Spa_g10288 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14647 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38756 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53269 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002035 VWF_A 282 463
IPR032838 Vwaint_dom 627 699
IPR001841 Znf_RING 95 124
No external refs found!