LOC_Os02g55600.1 (LOC_Os02g55600)


Aliases : LOC_Os02g55600

Description : no hits & (original description: none)


Gene families : OG0000329 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000329_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g55600.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00253230 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00049p00216010 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G52342 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
AT1G67910 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
AT5G25280 No alias serine-rich protein-related 0.03 OrthoFinder output from all 47 species
Aev_g08787 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g36134 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36962 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene11466.t1 Aspi01Gene11466 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene43626.t1 Aspi01Gene43626 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g02458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G038200.1 Ceric.23G038200 not classified & original description: pacid=50611305... 0.02 OrthoFinder output from all 47 species
Ceric.29G029500.1 Ceric.29G029500 not classified & original description: pacid=50625444... 0.05 OrthoFinder output from all 47 species
Ceric.32G012100.1 Ceric.32G012100 not classified & original description: pacid=50598160... 0.02 OrthoFinder output from all 47 species
Ceric.32G044400.1 Ceric.32G044400 not classified & original description: pacid=50598340... 0.04 OrthoFinder output from all 47 species
Dcu_g29877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45689 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g16430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_11274 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_29842 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_36288 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_37466 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_37761 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g11844 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g27509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35752 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_126512g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g24638 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g42418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08882 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008383 No alias not classified & original description: CDS=1-396 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015803 No alias not classified & original description: CDS=1-222 0.03 OrthoFinder output from all 47 species
Solyc03g117290.1.1 Solyc03g117290 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc03g120160.1.1 Solyc03g120160 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc07g007330.1.1 Solyc07g007330 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc07g045200.1.1 Solyc07g045200 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g009880.1.1 Solyc12g009880 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g00539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016142_P001 Zm00001e016142 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!