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  5. LOC_Os02g54860.1

LOC_Os02g54860.1 (XBAT32, LOC_Os02g54860)


Aliases : XBAT32, LOC_Os02g54860

Description : RING-HC-class E3 ligase


Gene families : OG0001806 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001806_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g54860.1

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene41950.t1 XBAT33, Aspi01Gene41950 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0467.g072821 XBAT33 E3 ubiquitin ligase *(XBAT3) & original description: CDS=935-3001 0.02 OrthoFinder output from all 47 species
Dac_g00918 XBAT33 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18268 XBAT33 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g16727 XBAT33 E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002233 XBAT33 E3 ubiquitin ligase *(XBAT3) & original description: CDS=343-1884 0.01 OrthoFinder output from all 47 species
Tin_g10343 XBAT33 E3 ubiquiTin ligase *(XBAT3) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR020683 DUF3447 123 242
IPR020683 DUF3447 55 116
IPR020683 DUF3447 258 312
No external refs found!