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  5. LOC_Os02g54580.1

LOC_Os02g54580.1 (LOC_Os02g54580)


Aliases : LOC_Os02g54580

Description : no hits & (original description: none)


Gene families : OG0001160 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001160_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g54580.1

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0001.g000105 No alias not classified & original description: CDS=1-1041 0.03 OrthoFinder output from all 47 species
Azfi_s0081.g038538 No alias not classified & original description: CDS=171-1316 0.02 OrthoFinder output from all 47 species
Dac_g16291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19513 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g04998 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25771 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g33567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
BP GO:0017006 protein-tetrapyrrole linkage IEP HCCA
BP GO:0017007 protein-bilin linkage IEP HCCA
BP GO:0017009 protein-phycocyanobilin linkage IEP HCCA
InterPro domains Description Start Stop
IPR007751 DUF676_lipase-like 132 357
No external refs found!