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  5. LOC_Os02g52260.1

LOC_Os02g52260.1 (LOC_Os02g52260)


Aliases : LOC_Os02g52260

Description : no hits & (original description: none)


Gene families : OG0000444 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000444_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g52260.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272260 PTAC8, TMP14,... Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.05 OrthoFinder output from all 47 species
AMTR_s00038p00072170 evm_27.TU.AmTr_v1... Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.03 OrthoFinder output from all 47 species
AT1G52220 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.07 OrthoFinder output from all 47 species
AT2G46820 PTAC8, TMP14, PSI-P, PSAP photosystem I P subunit 0.11 OrthoFinder output from all 47 species
AT4G01150 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.07 OrthoFinder output from all 47 species
Adi_g008425 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Adi_g011488 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Adi_g075200 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Adi_g075201 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Adi_g075653 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Aev_g30164 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Aev_g34361 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Ala_g00864 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Ala_g00922 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Als_g10532 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.09 OrthoFinder output from all 47 species
Als_g22742 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Als_g27752 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.08 OrthoFinder output from all 47 species
Aob_g02852 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Aob_g12719 PTAC8, TMP14, PSI-P, PSAP regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Aob_g35859 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Aop_g00252 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Aop_g49644 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Aop_g70950 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene23175.t1 Aspi01Gene23175 regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene23175.t2 Aspi01Gene23175 regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene46854.t1 Aspi01Gene46854 regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene69285.t1 Aspi01Gene69285 regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Azfi_s0110.g045491 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Cba_g02293 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.07 OrthoFinder output from all 47 species
Cba_g09234 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Cba_g09583 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Cba_g14136 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Ceric.05G101400.1 Ceric.05G101400 regulatory factor *(CURT) of thylakoid grana stacking &... 0.08 OrthoFinder output from all 47 species
Ceric.08G028200.1 Ceric.08G028200 regulatory factor *(CURT) of thylakoid grana stacking &... 0.1 OrthoFinder output from all 47 species
Ceric.25G072200.1 Ceric.25G072200 regulatory factor *(CURT) of thylakoid grana stacking &... 0.1 OrthoFinder output from all 47 species
Ceric.26G013600.1 Ceric.26G013600 regulatory factor *(CURT) of thylakoid grana stacking &... 0.07 OrthoFinder output from all 47 species
Dac_g00365 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Dac_g08388 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Dac_g10202 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Dcu_g05104 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.07 OrthoFinder output from all 47 species
Dcu_g10196 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.07 OrthoFinder output from all 47 species
Dcu_g34747 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.07 OrthoFinder output from all 47 species
Dcu_g41769 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Dde_g06506 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Dde_g46066 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Dde_g50772 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.08 OrthoFinder output from all 47 species
Ehy_g05318 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.07 OrthoFinder output from all 47 species
Ehy_g19545 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Ehy_g25382 PTAC8, TMP14, PSI-P, PSAP regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Ehy_g28043 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.08 OrthoFinder output from all 47 species
GSVIVT01027447001 PTAC8, TMP14, PSI-P, PSAP Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.08 OrthoFinder output from all 47 species
GSVIVT01028749001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.09 OrthoFinder output from all 47 species
Gb_09245 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.08 OrthoFinder output from all 47 species
Gb_37042 PTAC8, TMP14, PSI-P, PSAP Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.04 OrthoFinder output from all 47 species
Len_g10683 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Len_g15575 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Len_g18439 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.07 OrthoFinder output from all 47 species
Len_g28315 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Len_g57586 PTAC8, TMP14, PSI-P, PSAP regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Lfl_g19368 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Lfl_g21744 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Lfl_g34028 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
MA_60075g0010 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.06 OrthoFinder output from all 47 species
MA_734271g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_904218g0010 PTAC8, TMP14, PSI-P, PSAP no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp1g25670.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.08 OrthoFinder output from all 47 species
Mp6g20800.1 PTAC8, TMP14, PSI-P, PSAP Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.08 OrthoFinder output from all 47 species
Mp6g20860.1 No alias Protein CURVATURE THYLAKOID 1C, chloroplastic... 0.09 OrthoFinder output from all 47 species
Msp_g04797 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Msp_g04798 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Msp_g05299 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Msp_g40930 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Nbi_g03415 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Nbi_g28257 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Nbi_g31183 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Ore_g10874 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Pir_g00176 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.07 OrthoFinder output from all 47 species
Pir_g00327 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.08 OrthoFinder output from all 47 species
Pir_g48383 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Pnu_g11391 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Pnu_g16623 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Pnu_g19759 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Pp3c16_11960V3.1 Pp3c16_11960 No annotation 0.01 OrthoFinder output from all 47 species
Ppi_g10594 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Ppi_g12227 PTAC8, TMP14, PSI-P, PSAP regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Ppi_g18345 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Ppi_g19920 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005098 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007392 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020672 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Sam_g06947 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Sam_g06948 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Sam_g28663 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Sam_g38625 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Smo49217 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.02 OrthoFinder output from all 47 species
Solyc01g095430.3.1 Solyc01g095430 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.12 OrthoFinder output from all 47 species
Solyc06g066620.4.1 Solyc06g066620 Protein CURVATURE THYLAKOID 1C, chloroplastic... 0.05 OrthoFinder output from all 47 species
Solyc10g005050.3.1 PTAC8, TMP14,... Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.08 OrthoFinder output from all 47 species
Solyc10g011770.4.1 Solyc10g011770 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.04 OrthoFinder output from all 47 species
Spa_g05035 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Spa_g06785 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Spa_g09664 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Spa_g23069 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Spa_g24039 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Tin_g01454 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Tin_g03736 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Tin_g05372 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Tin_g13497 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Zm00001e000193_P001 Zm00001e000193 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.07 OrthoFinder output from all 47 species
Zm00001e015912_P002 Zm00001e015912 Protein CURVATURE THYLAKOID 1D, chloroplastic... 0.04 OrthoFinder output from all 47 species
Zm00001e023473_P001 Zm00001e023473 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.08 OrthoFinder output from all 47 species
Zm00001e029009_P001 Zm00001e029009 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e030948_P002 Zm00001e030948 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.09 OrthoFinder output from all 47 species
Zm00001e034870_P002 PTAC8, TMP14,... no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025564 CAAD_dom 132 205
No external refs found!