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  5. LOC_Os02g50960.1

LOC_Os02g50960.1 (ATPIN1, PIN1, LOC_Os02g50960)


Aliases : ATPIN1, PIN1, LOC_Os02g50960

Description : auxin transporter (PIN). auxin efflux transporter (PIN)


Gene families : OG0000569 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000569_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g50960.1
Cluster HCCA: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00241000 PIN5,... Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
AMTR_s00101p00149240 ATPIN1, PIN1,... Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
AT1G23080 PIN7, ATPIN7 Auxin efflux carrier family protein 0.04 OrthoFinder output from all 47 species
AT1G70940 PIN3, ATPIN3 Auxin efflux carrier family protein 0.03 OrthoFinder output from all 47 species
AT5G15100 PIN8, ATPIN8 Auxin efflux carrier family protein 0.03 OrthoFinder output from all 47 species
AT5G16530 PIN5 Auxin efflux carrier family protein 0.03 OrthoFinder output from all 47 species
Adi_g081464 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08758 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13338 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g21847 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39537 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g32966 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18588 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31213 PIN3, ATPIN3 auxin efflux transporter *(PIN) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene04220.t1 PIN3, ATPIN3,... auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0100.g044237 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description:... 0.02 OrthoFinder output from all 47 species
Azfi_s0215.g058367 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description:... 0.04 OrthoFinder output from all 47 species
Cba_g38942 PIN3, ATPIN3 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G088400.1 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.15G033200.1 ATPIN1, PIN1,... auxin efflux transporter *(PIN) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g13516 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g14691 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g18755 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g33596 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08494 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19454 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008430001 ATPIN1, PIN1 Solute transport.carrier-mediated transport.BART... 0.05 OrthoFinder output from all 47 species
GSVIVT01025749001 ATPIN1, PIN1 Solute transport.carrier-mediated transport.BART... 0.04 OrthoFinder output from all 47 species
Gb_23207 ATPIN4, PIN4 auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
LOC_Os01g45550.1 ATPIN4, PIN4,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
Len_g02406 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g04811 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g27960 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g19133 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40526 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10433084g0010 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
MA_61553g0010 PIN3, ATPIN3 auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
MA_69724g0010 ATPIN1, PIN1 auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Mp3g21660.1 ATPIN4, PIN4 auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Ore_g05421 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g07069 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g11165 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26084 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02383 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07600 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011672 PIN6 auxin efflux transporter *(PIN) & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g26841 No alias auxin efflux transporter *(PIN) & original description: none 0.06 OrthoFinder output from all 47 species
Smo119024 EIR1, WAV6,... Solute transport.carrier-mediated transport.BART... 0.02 OrthoFinder output from all 47 species
Smo234325 ATPIN1, PIN1 Solute transport.carrier-mediated transport.BART... 0.02 OrthoFinder output from all 47 species
Smo99301 ATPIN4, PIN4 Solute transport.carrier-mediated transport.BART... 0.05 OrthoFinder output from all 47 species
Solyc03g118740.3.1 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
Solyc04g007690.3.1 PIN3, ATPIN3,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
Solyc05g008060.4.1 PIN3, ATPIN3,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Solyc07g006900.2.1 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Solyc10g078370.2.1 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Spa_g41931 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010118_P004 PIN5, Zm00001e010118 auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Zm00001e015800_P001 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.14 OrthoFinder output from all 47 species
Zm00001e023910_P002 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 OrthoFinder output from all 47 species
Zm00001e024071_P002 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
Zm00001e036414_P001 ATPIN4, PIN4,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR004776 Mem_trans 9 590
No external refs found!