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  5. LOC_Os02g50860.1

LOC_Os02g50860.1 (ATRAC8, ATROP10,...)


Aliases : ATRAC8, ATROP10, ROP10, ARAC8, LOC_Os02g50860

Description : small GTPase (ROP)


Gene families : OG0000503 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000503_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g50860.1
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00186910 ATRAC11, ARAC11,... Multi-process regulation.Rop GTPase regulatory... 0.05 OrthoFinder output from all 47 species
AT1G20090 ATRAC4, ARAC4,... RHO-related protein from plants 2 0.04 OrthoFinder output from all 47 species
AT1G75840 ATROP4, ROP4,... RAC-like GTP binding protein 5 0.05 OrthoFinder output from all 47 species
AT3G51300 ATRAC11, ARAC11,... RHO-related protein from plants 1 0.03 OrthoFinder output from all 47 species
AT4G35020 ARAC3, RAC3,... RAC-like 3 0.02 OrthoFinder output from all 47 species
AT4G35950 RAC2, ARAC6,... RAC-like 6 0.03 OrthoFinder output from all 47 species
AT5G45970 ARAC2, RAC2,... RAC-like 2 0.07 OrthoFinder output from all 47 species
Adi_g003765 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g051525 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13243 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g01235 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g03825 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06146 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28429 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g48079 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06422 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03079 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g35244 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38810 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35809.t1 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14200 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38441 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.25G052700.1 ARAC3, RAC3,... small GTPase *(ROP) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.36G016200.1 ARAC3, RAC3,... small GTPase *(ROP) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.38G025400.1 ATRAC11, ARAC11,... small GTPase *(ROP) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g03585 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04531 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g42232 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09488 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g51070 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18052 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018319001 ARAC9, ATROP8, ROP8 Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
GSVIVT01018729001 ATRAC1, ROP3,... Multi-process regulation.Rop GTPase regulatory... 0.05 OrthoFinder output from all 47 species
GSVIVT01020653001 ATROP4, ROP4,... Multi-process regulation.Rop GTPase regulatory... 0.05 OrthoFinder output from all 47 species
GSVIVT01021145001 ARAC2, RAC2,... Multi-process regulation.Rop GTPase regulatory... 0.04 OrthoFinder output from all 47 species
GSVIVT01024029001 ATRAC1, ROP3,... Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
LOC_Os06g12790.1 ATRAC8, ATROP10,... small GTPase (ROP) 0.04 OrthoFinder output from all 47 species
Len_g18829 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g23902 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29379 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38022 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
MA_36432g0010 ARAC3, RAC3,... small GTPase (ROP) 0.03 OrthoFinder output from all 47 species
MA_948089g0010 ATRAC11, ARAC11,... small GTPase (ROP) 0.03 OrthoFinder output from all 47 species
Msp_g38983 ATRAC11, ARAC11,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g01865 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05700 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04924 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g11648 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012576 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: CDS=1-624 0.02 OrthoFinder output from all 47 species
Sam_g04900 No alias small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07595 No alias small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g51099 No alias small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51141 No alias small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g088780.3.1 ARAC9, ATROP8,... small GTPase (ROP) 0.03 OrthoFinder output from all 47 species
Solyc02g077400.4.1 ARAC2, RAC2,... small GTPase (ROP) 0.05 OrthoFinder output from all 47 species
Solyc07g020800.3.1 ARAC7, ROP9,... small GTPase (ROP) 0.04 OrthoFinder output from all 47 species
Spa_g01671 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29989 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g32766 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03146 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05437 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05440 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e031297_P001 ARAC7, ROP9,... small GTPase (ROP) 0.03 OrthoFinder output from all 47 species
Zm00001e032127_P001 ARAC7, ROP9,... small GTPase (ROP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 10 179
No external refs found!