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  5. LOC_Os02g50840.2

LOC_Os02g50840.2 (LOC_Os02g50840)


Aliases : LOC_Os02g50840

Description : no hits & (original description: none)


Gene families : OG0000514 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000514_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g50840.2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00070p00141920 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00088p00111920 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G48050 No alias BAH domain ;TFIIS helical bundle-like domain 0.06 OrthoFinder output from all 47 species
AT3G48060 No alias BAH domain ;TFIIS helical bundle-like domain 0.04 OrthoFinder output from all 47 species
Adi_g005148 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g47750 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Ala_g20600 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.06 OrthoFinder output from all 47 species
Aob_g02378 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g17691 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.06 OrthoFinder output from all 47 species
Aspi01Gene55047.t1 Aspi01Gene55047 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0100.g044240 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Azfi_s0276.g061462 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Cba_g07774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.24G078000.1 Ceric.24G078000 regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.05 OrthoFinder output from all 47 species
Cre06.g292650 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g15540 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Dac_g16945 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Ehy_g07942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14694 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
GSVIVT01007806001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01024041001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01032521001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_05690 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g11454 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Lfl_g05021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g11979 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
MA_10428034g0020 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_33300g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_39143g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_39143g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_710118g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp4g16230.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g04481 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Ore_g00447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25799 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Ore_g35771 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g06454 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Pir_g13634 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Pnu_g13846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41929 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013761 No alias not classified & original description: CDS=1-4083 0.03 OrthoFinder output from all 47 species
Sam_g04139 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g04915 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18607 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g29218 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.06 OrthoFinder output from all 47 species
Solyc03g114060.3.1 Solyc03g114060 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc06g071350.4.1 Solyc06g071350 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc12g089320.3.1 Solyc12g089320 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e002441_P003 Zm00001e002441 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Zm00001e013353_P001 Zm00001e013353 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e037792_P001 Zm00001e037792 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e037793_P001 Zm00001e037793 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR017923 TFIIS_N 399 448
IPR001025 BAH_dom 91 197
No external refs found!