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  5. LOC_Os02g50799.1

LOC_Os02g50799.1 (NUA, AtTPR, LOC_Os02g50799)


Aliases : NUA, AtTPR, LOC_Os02g50799

Description : NUA nucleoporin of nuclear pore complex


Gene families : OG0003960 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003960_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g50799.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00124730 NUA, AtTPR,... Protein translocation.nucleus.nucleocytoplasmic... 0.05 OrthoFinder output from all 47 species
AT1G79280 NUA, AtTPR nuclear pore anchor 0.03 OrthoFinder output from all 47 species
Adi_g055513 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.07 OrthoFinder output from all 47 species
Aev_g02612 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.03 OrthoFinder output from all 47 species
Ala_g07174 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.05 OrthoFinder output from all 47 species
Als_g57232 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.02 OrthoFinder output from all 47 species
Aob_g26121 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.02 OrthoFinder output from all 47 species
Aop_g09061 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene14388.t1 NUA, AtTPR,... nucleoporin of nuclear pore complex *(NUA) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene40431.t1 NUA, AtTPR,... nucleoporin of nuclear pore complex *(NUA) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene40432.t1 NUA, AtTPR,... nucleoporin of nuclear pore complex *(NUA) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0150.g053279 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.02 OrthoFinder output from all 47 species
Cba_g33695 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.04 OrthoFinder output from all 47 species
Ceric.23G046200.1 NUA, AtTPR,... nucleoporin of nuclear pore complex *(NUA) & original... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000404.46 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
Dac_g14678 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g03218 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.02 OrthoFinder output from all 47 species
Dde_g09517 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g15153 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01036698001 NUA, AtTPR Protein translocation.nucleus.nucleocytoplasmic... 0.06 OrthoFinder output from all 47 species
Gb_36757 NUA, AtTPR NUA nucleoporin of nuclear pore complex 0.04 OrthoFinder output from all 47 species
Len_g13910 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.07 OrthoFinder output from all 47 species
Lfl_g03520 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.03 OrthoFinder output from all 47 species
MA_10287420g0010 NUA, AtTPR no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10435343g0040 NUA, AtTPR NUA nucleoporin of nuclear pore complex 0.07 OrthoFinder output from all 47 species
MA_109011g0010 NUA, AtTPR NUA nucleoporin of nuclear pore complex 0.07 OrthoFinder output from all 47 species
MA_33097g0010 NUA, AtTPR Nuclear-pore anchor OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
MA_929786g0010 NUA, AtTPR NUA nucleoporin of nuclear pore complex 0.05 OrthoFinder output from all 47 species
Mp2g14600.1 NUA, AtTPR NUA nucleoporin of nuclear pore complex 0.04 OrthoFinder output from all 47 species
Msp_g15712 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.06 OrthoFinder output from all 47 species
Nbi_g24509 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g44472 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.05 OrthoFinder output from all 47 species
Sam_g04166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18065 No alias nucleoporin of nuclear pore complex *(NUA) & original... 0.02 OrthoFinder output from all 47 species
Smo444132 NUA, AtTPR Protein translocation.nucleus.nucleocytoplasmic... 0.06 OrthoFinder output from all 47 species
Solyc06g053570.2.1 NUA, AtTPR,... NUA nucleoporin of nuclear pore complex 0.08 OrthoFinder output from all 47 species
Spa_g10543 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.06 OrthoFinder output from all 47 species
Tin_g12694 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e023916_P004 NUA, AtTPR,... NUA nucleoporin of nuclear pore complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!