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  5. LOC_Os02g49980.1

LOC_Os02g49980.1 (ARLA1A, ATARLA1A,...)


Aliases : ARLA1A, ATARLA1A, LOC_Os02g49980

Description : small GTPase (ARL8)


Gene families : OG0002135 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002135_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g49980.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g103658 ARLA1C, ATARLA1C small GTPase *(ARL8) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07591 ARLA1C, ATARLA1C small GTPase *(ARL8) & original description: none 0.02 OrthoFinder output from all 47 species
Cre17.g708250 ARLA1D, ATARLA1D External stimuli response.biotic stress.tobamovirus... 0.04 OrthoFinder output from all 47 species
GSVIVT01002075001 ARLA1C, ATARLA1C External stimuli response.biotic stress.tobamovirus... 0.04 OrthoFinder output from all 47 species
Gb_38097 ARLA1C, ATARLA1C small GTPase (ARL8) 0.04 OrthoFinder output from all 47 species
Spa_g05828 ARLA1C, ATARLA1C small GTPase *(ARL8) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e038776_P001 ARLA1C,... small GTPase (ARL8) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 9 178
No external refs found!