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  5. LOC_Os02g49410.1

LOC_Os02g49410.1 (EMB212, NF-YB9, LEC1,...)


Aliases : EMB212, NF-YB9, LEC1, EMB 212, LOC_Os02g49410

Description : component NF-YB of NF-Y transcription factor complex


Gene families : OG0000364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000364_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g49410.1
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00202310 NF-YB5,... RNA biosynthesis.transcriptional activation.NF-Y... 0.03 OrthoFinder output from all 47 species
AT1G21970 EMB212, NF-YB9,... Histone superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G47810 NF-YB5 nuclear factor Y, subunit B5 0.04 OrthoFinder output from all 47 species
AT4G14540 NF-YB3 nuclear factor Y, subunit B3 0.02 OrthoFinder output from all 47 species
AT5G47670 NF-YB6, L1L nuclear factor Y, subunit B6 0.05 OrthoFinder output from all 47 species
Adi_g078592 NF-YB6, L1L transcription factor *(LEC) involved in seed maturation... 0.02 OrthoFinder output from all 47 species
Ala_g15546 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Aop_g04354 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.01 OrthoFinder output from all 47 species
Ceric.18G000500.1 NF-YB3, Ceric.18G000500 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Dac_g16411 NF-YB6, L1L transcription factor *(LEC) involved in seed maturation... 0.02 OrthoFinder output from all 47 species
GSVIVT01002895001 NF-YB6, L1L RNA biosynthesis.transcriptional activation.NF-Y... 0.03 OrthoFinder output from all 47 species
Gb_00520 NF-YB3 component NF-YB of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
Len_g01601 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Mp4g13360.1 NF-YB3 component NF-YB of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
Msp_g09416 NF-YB2 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Nbi_g00372 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Nbi_g02688 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.01 OrthoFinder output from all 47 species
Pir_g45029 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Smo69246 NF-YB2 RNA biosynthesis.transcriptional activation.NF-Y... 0.02 OrthoFinder output from all 47 species
Solyc01g067130.4.1 NF-YB5, Solyc01g067130 component NF-YB of NF-Y transcription factor complex 0.02 OrthoFinder output from all 47 species
Solyc05g005390.3.1 NF-YB6, L1L,... component NF-YB of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
Solyc10g009440.4.1 NF-YB6, L1L,... component NF-YB of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
Zm00001e015699_P001 NF-YB6, L1L,... component NF-YB of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
Zm00001e015700_P001 NF-YB6, L1L,... component NF-YB of NF-Y transcription factor complex 0.05 OrthoFinder output from all 47 species
Zm00001e018715_P001 NF-YB5, Zm00001e018715 component NF-YB of NF-Y transcription factor complex 0.01 OrthoFinder output from all 47 species
Zm00001e021676_P001 NF-YB3, Zm00001e021676 component NF-YB of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
Zm00001e023433_P001 NF-YB6, L1L,... component NF-YB of NF-Y transcription factor complex 0.04 OrthoFinder output from all 47 species
Zm00001e036848_P001 EMB212, NF-YB9,... component NF-YB of NF-Y transcription factor complex 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 32 92
No external refs found!