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  5. LOC_Os02g49290.1

LOC_Os02g49290.1 (LOC_Os02g49290)


Aliases : LOC_Os02g49290

Description : no hits & (original description: none)


Gene families : OG0000166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g49290.1

Target Alias Description ECC score Gene Family Method Actions
ChrUn.fgenesh.mRNA.55 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g03590.1 LOC_Os01g03590 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g19960.1 LOC_Os01g19960 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g16120.1 LOC_Os02g16120 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g24310.1 LOC_Os02g24310 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g25370.1 LOC_Os02g25370 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os02g25520.1 LOC_Os02g25520 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g03710.1 LOC_Os04g03710 Subtilisin-like protease SBT3.10 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g07170.1 LOC_Os04g07170 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os04g10020.1 LOC_Os04g10020 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g11410.1 LOC_Os04g11410 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os04g12390.1 LOC_Os04g12390 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os04g29900.1 LOC_Os04g29900 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g03950.1 LOC_Os05g03950 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g16580.1 LOC_Os05g16580 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g26100.1 LOC_Os05g26100 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g39460.1 LOC_Os05g39460 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g48110.1 LOC_Os05g48110 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g10380.1 LOC_Os06g10380 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g21150.1 LOC_Os06g21150 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g28370.1 LOC_Os06g28370 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g35350.1 LOC_Os06g35350 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g03350.1 LOC_Os07g03350 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g26070.1 LOC_Os07g26070 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g10230.1 LOC_Os08g10230 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g12280.1 LOC_Os08g12280 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os08g13300.1 LOC_Os08g13300 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g34590.1 LOC_Os08g34590 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g01900.1 LOC_Os09g01900 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g04200.1 LOC_Os09g04200 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os09g09060.1 LOC_Os09g09060 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g12100.1 LOC_Os09g12100 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g16890.1 LOC_Os09g16890 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os09g25240.1 LOC_Os09g25240 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g07562.1 LOC_Os10g07562 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os10g08650.1 LOC_Os10g08650 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os10g12539.1 LOC_Os10g12539 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os10g29010.1 LOC_Os10g29010 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g14350.1 LOC_Os11g14350 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g26250.1 LOC_Os11g26250 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g35762.1 LOC_Os11g35762 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g41050.1 LOC_Os11g41050 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os11g45670.1 LOC_Os11g45670 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g01870.1 LOC_Os12g01870 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g11600.1 LOC_Os12g11600 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g13080.1 LOC_Os12g13080 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g14200.1 LOC_Os12g14200 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g14650.1 LOC_Os12g14650 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g28350.1 LOC_Os12g28350 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e029348_P001 Zm00001e029348 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 815 928
No external refs found!