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  5. LOC_Os02g49200.1

LOC_Os02g49200.1 (LOC_Os02g49200)


Aliases : LOC_Os02g49200

Description : no hits & (original description: none)


Gene families : OG0011204 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011204_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g49200.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g71850.1 FRS5, LOC_Os01g71850 transcription factor (FAR1) 0.04 OrthoFinder output from all 47 species
LOC_Os04g44630.1 FRS5, LOC_Os04g44630 transcription factor (FAR1) 0.05 OrthoFinder output from all 47 species
LOC_Os07g01270.1 FRS5, LOC_Os07g01270 transcription factor (FAR1) 0.05 OrthoFinder output from all 47 species
LOC_Os09g08460.1 FRS5, LOC_Os09g08460 transcription factor (FAR1) 0.05 OrthoFinder output from all 47 species
LOC_Os09g25510.1 FRS4, LOC_Os09g25510 transcription factor (FAR1) 0.04 OrthoFinder output from all 47 species
LOC_Os12g24400.1 FRS5, LOC_Os12g24400 transcription factor (FAR1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!