LOC_Os02g49080.1 (LOC_Os02g49080)


Aliases : LOC_Os02g49080

Description : KH domain-containing protein At5g56140 OS=Arabidopsis thaliana (sp|q9fkt4|qkil2_arath : 364.0)


Gene families : OG0001245 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001245_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g49080.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g057612 No alias STAR-type post-transcriptionally regulatory factor &... 0.03 OrthoFinder output from all 47 species
Als_g38067 No alias STAR-type post-transcriptionally regulatory factor &... 0.02 OrthoFinder output from all 47 species
Aob_g17232 No alias STAR-type post-transcriptionally regulatory factor &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene14312.t1 Aspi01Gene14312 STAR-type post-transcriptionally regulatory factor &... 0.02 OrthoFinder output from all 47 species
Ceric.06G053700.1 Ceric.06G053700 STAR-type post-transcriptionally regulatory factor &... 0.03 OrthoFinder output from all 47 species
Ceric.31G013300.1 Ceric.31G013300 STAR-type post-transcriptionally regulatory factor &... 0.04 OrthoFinder output from all 47 species
Dde_g01535 No alias STAR-type post-transcriptionally regulatory factor &... 0.03 OrthoFinder output from all 47 species
Ehy_g23208 No alias STAR-type post-transcriptionally regulatory factor &... 0.03 OrthoFinder output from all 47 species
GSVIVT01014762001 No alias KH domain-containing protein At5g56140 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01029865001 No alias KH domain-containing protein At3g08620 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Lfl_g26702 No alias STAR-type post-transcriptionally regulatory factor &... 0.03 OrthoFinder output from all 47 species
Solyc07g066070.3.1 Solyc07g066070 KH domain-containing protein At5g56140 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Tin_g10370 No alias STAR-type post-transcriptionally regulatory factor &... 0.03 OrthoFinder output from all 47 species
Zm00001e015688_P001 Zm00001e015688 KH domain-containing protein At5g56140 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Zm00001e023400_P001 Zm00001e023400 KH domain-containing protein At5g56140 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR032377 STAR_dimer 36 74
No external refs found!