Aliases : LOC_Os02g48340
Description : Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana (sp|q9m1s3|arp1_arath : 102.0)
Gene families : OG0000717 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000717_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os02g48340.1 | |
Cluster | HCCA: Cluster_169 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G53720 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g14463 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g72834.1 | LOC_Os01g72834 | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
Msp_g16573 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g21802 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e015636_P001 | Zm00001e015636 | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e023856_P001 | Zm00001e023856 | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005215 | transporter activity | IEP | HCCA |
MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | HCCA |
MF | GO:0015095 | magnesium ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
BP | GO:0015693 | magnesium ion transport | IEP | HCCA |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | HCCA |
MF | GO:0019239 | deaminase activity | IEP | HCCA |
MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
MF | GO:0032977 | membrane insertase activity | IEP | HCCA |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
MF | GO:0140104 | molecular carrier activity | IEP | HCCA |
MF | GO:0140597 | protein carrier chaperone | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000504 | RRM_dom | 39 | 83 |
No external refs found! |