LOC_Os01g74540.1


Description : transcription factor (GATA)


Gene families : OG_01_0000094 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000094_tree ,
OG_02_0000055 (LandPlants) Phylogenetic Tree(s): OG_02_0000055_tree ,
OG_03_0000264 (SeedPlants) Phylogenetic Tree(s): OG_03_0000264_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g74540.1
Cluster HCCA: Cluster_239

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00074220 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AMTR_s00025p00250380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
GSVIVT01015204001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
LOC_Os10g40810.1 No alias transcription factor (GATA) 0.04 Archaeplastida
MA_10436047g0010 No alias transcription factor (GATA) 0.02 Archaeplastida
MA_44185g0010 No alias transcription factor (GATA) 0.02 Archaeplastida
Solyc02g085190.2.1 No alias transcription factor (GATA) 0.03 Archaeplastida
Solyc04g015360.3.1 No alias transcription factor (GATA) 0.02 Archaeplastida
Zm00001e028245_P001 No alias transcription factor (GATA) 0.02 Archaeplastida
Zm00001e032513_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
AMTR_s00004p00074220 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 LandPlants
AMTR_s00025p00250380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 LandPlants
AT2G18380 GATA20 GATA transcription factor 20 0.02 LandPlants
GSVIVT01018951001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 LandPlants
LOC_Os12g42970.1 No alias transcription factor (GATA) 0.03 LandPlants
Solyc02g085190.2.1 No alias transcription factor (GATA) 0.02 LandPlants
Zm00001e006272_P001 No alias transcription factor (GATA) 0.02 LandPlants
Zm00001e032219_P001 No alias transcription factor (GATA) 0.01 LandPlants
Zm00001e032513_P001 No alias no hits & (original description: none) 0.02 LandPlants
AMTR_s00025p00250380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 SeedPlants
Gb_25531 No alias transcription factor (GATA) 0.01 SeedPlants
Zm00001e006272_P001 No alias transcription factor (GATA) 0.02 SeedPlants
Zm00001e026601_P001 No alias transcription factor (GATA) 0.01 SeedPlants
Zm00001e032513_P001 No alias no hits & (original description: none) 0.02 SeedPlants

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000679 Znf_GATA 24 58
No external refs found!