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  5. LOC_Os02g47580.1

LOC_Os02g47580.1 (LOC_Os02g47580)


Aliases : LOC_Os02g47580

Description : no hits & (original description: none)


Gene families : OG0002571 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002571_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g47580.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00205190 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Azfi_s0007.g011113 No alias not classified & original description: CDS=221-1471 0.03 OrthoFinder output from all 47 species
Cba_g16809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!