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  5. LOC_Os02g47500.1

LOC_Os02g47500.1 (LOC_Os02g47500)


Aliases : LOC_Os02g47500

Description : solute transporter (UmamiT)


Gene families : OG0000138 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000138_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g47500.1
Cluster HCCA: Cluster_403

Target Alias Description ECC score Gene Family Method Actions
AT4G01440 No alias nodulin MtN21 /EamA-like transporter family protein 0.04 OrthoFinder output from all 47 species
Aev_g43923 WAT1 solute transporter *(UmamiT) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07924 WAT1 solute transporter *(UmamiT) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g01545 No alias solute transporter *(UmamiT) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g05456 No alias solute transporter *(UmamiT) & original description: none 0.02 OrthoFinder output from all 47 species
Smo418866 No alias Solute transport.carrier-mediated transport.DMT... 0.06 OrthoFinder output from all 47 species
Solyc11g005350.2.1 Solyc11g005350 solute transporter (UmamiT) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR000620 EamA_dom 207 344
IPR000620 EamA_dom 19 160
No external refs found!