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  5. LOC_Os02g47370.1

LOC_Os02g47370.1 (LOC_Os02g47370)


Aliases : LOC_Os02g47370

Description : transcription factor (Trihelix)


Gene families : OG0001890 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001890_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g47370.1
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
Aev_g15411 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g10269 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12849 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g21090 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40808.t1 Aspi01Gene40808 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52683.t2 Aspi01Gene52683 Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05886 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.35G046600.1 Ceric.35G046600 Trihelix-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g19503 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19765 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g03740.1 LOC_Os05g03740 transcription factor (Trihelix) 0.05 OrthoFinder output from all 47 species
Len_g19288 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12494 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g20870.1 No alias transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
Nbi_g42102 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23128 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30407 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g45245 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g22602 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g31822 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g005560.4.1 Solyc09g005560 transcription factor (Trihelix) 0.05 OrthoFinder output from all 47 species
Spa_g51759 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!