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  5. LOC_Os02g45820.1

LOC_Os02g45820.1 (LOC_Os02g45820)


Aliases : LOC_Os02g45820

Description : component Tim13 of inner mitochondrion membrane TIM22 insertion system


Gene families : OG0002244 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002244_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g45820.1
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00198440 evm_27.TU.AmTr_v1... Protein translocation.mitochondrion.inner mitochondrion... 0.07 OrthoFinder output from all 47 species
AT1G61570 TIM13 translocase of the inner mitochondrial membrane 13 0.03 OrthoFinder output from all 47 species
AT5G50810 TIM8 translocase inner membrane subunit 8 0.03 OrthoFinder output from all 47 species
Aop_g35679 No alias component *(Tim13) of inner mitochondrion membrane TIM22... 0.04 OrthoFinder output from all 47 species
Ceric.32G011900.1 TIM13, Ceric.32G011900 component *(Tim13) of inner mitochondrion membrane TIM22... 0.05 OrthoFinder output from all 47 species
Ehy_g01844 No alias component *(Tim13) of inner mitochondrion membrane TIM22... 0.02 OrthoFinder output from all 47 species
GSVIVT01008600001 No alias Protein translocation.mitochondrion.inner mitochondrion... 0.07 OrthoFinder output from all 47 species
MA_119926g0010 TIM8 component Tim8 of inner mitochondrion membrane TIM22... 0.02 OrthoFinder output from all 47 species
MA_15606g0010 TIM13 component Tim13 of inner mitochondrion membrane TIM22... 0.02 OrthoFinder output from all 47 species
Smo228905 No alias Protein translocation.mitochondrion.inner mitochondrion... 0.05 OrthoFinder output from all 47 species
Smo82076 TIM8 Protein translocation.mitochondrion.inner mitochondrion... 0.03 OrthoFinder output from all 47 species
Solyc06g072600.3.1 TIM8, Solyc06g072600 component Tim8 of inner mitochondrion membrane TIM22... 0.03 OrthoFinder output from all 47 species
Solyc08g083380.2.1 TIM13, Solyc08g083380 component Tim13 of inner mitochondrion membrane TIM22... 0.03 OrthoFinder output from all 47 species
Zm00001e003692_P001 TIM8, Zm00001e003692 component Tim8 of inner mitochondrion membrane TIM22... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004217 Tim10-like 20 79
No external refs found!