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  5. LOC_Os02g45810.1

LOC_Os02g45810.1 (ATTTG1, TTG, TTG1,...)


Aliases : ATTTG1, TTG, TTG1, URM23, LOC_Os02g45810

Description : Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana (sp|q9xgn1|ttg1_arath : 385.0)


Gene families : OG0002975 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002975_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g45810.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00271900 LWD1, ATAN11,... Multi-process regulation.circadian clock.morning element... 0.02 OrthoFinder output from all 47 species
AMTR_s00040p00131380 LWD1, ATAN11,... Multi-process regulation.circadian clock.morning element... 0.05 OrthoFinder output from all 47 species
Adi_g047445 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g37738 LWD1, ATAN11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_40146 LWD1, ATAN11 WD repeat-containing protein LWD1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g32430.1 LWD1, ATAN11,... WD repeat-containing protein LWD1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Mp5g03900.1 LWD1, ATAN11 LWD circadian clock activation factor 0.02 OrthoFinder output from all 47 species
Msp_g01502 LWD1, ATAN11 circadian clock activation factor *(LWD) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g06834 LWD1, ATAN11 circadian clock activation factor *(LWD) & original... 0.02 OrthoFinder output from all 47 species
Sam_g17895 No alias circadian clock activation factor *(LWD) & original... 0.03 OrthoFinder output from all 47 species
Solyc03g097340.1.1 ATTTG1, TTG,... Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e015450_P001 ATTTG1, TTG,... Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 182 213
No external refs found!