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  5. LOC_Os02g45540.1

LOC_Os02g45540.1 (NRS/ER, UER1, LOC_Os02g45540)


Aliases : NRS/ER, UER1, LOC_Os02g45540

Description : UDP-L-rhamnose synthase


Gene families : OG0000903 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000903_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g45540.1

Target Alias Description ECC score Gene Family Method Actions
AT3G14790 ATRHM3, RHM3 rhamnose biosynthesis 3 0.04 OrthoFinder output from all 47 species
Adi_g010835 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g048696 NRS/ER, UER1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12054 ATRHM2, RHM2,... UDP-L-rhamnose synthase *(RHM) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01244 NRS/ER, UER1 dTDP-rhamnose synthase *(NRS-ER) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14366 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.161 NRS/ER, UER1 Carbohydrate metabolism.nucleotide sugar... 0.01 OrthoFinder output from all 47 species
Gb_35655 NRS/ER, UER1 UDP-L-rhamnose synthase 0.04 OrthoFinder output from all 47 species
Len_g07305 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09373 NRS/ER, UER1 dTDP-rhamnose synthase *(NRS-ER) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10663 NRS/ER, UER1 dTDP-rhamnose synthase *(NRS-ER) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g28967 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g062130.3.1 RHM1, ROL1,... UDP-L-rhamnose synthase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR029903 RmlD-like-bd 25 197
No external refs found!