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  5. LOC_Os02g44300.1

LOC_Os02g44300.1 (LOC_Os02g44300)


Aliases : LOC_Os02g44300

Description : contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface


Gene families : OG0000655 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g44300.1

Target Alias Description ECC score Gene Family Method Actions
AT1G51270 No alias structural molecules;transmembrane receptors;structural molecules 0.03 OrthoFinder output from all 47 species
Dcu_g04468 PVA12 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Nbi_g03394 PVA12 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Pir_g23773 VAP27-2 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Tin_g28738 No alias contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Zm00001e020953_P001 BSK1, Zm00001e020953 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR000535 MSP_dom 6 110
No external refs found!