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  5. LOC_Os02g43690.3

LOC_Os02g43690.3 (ATRAB1B, RABD2A,...)


Aliases : ATRAB1B, RABD2A, ATRABD2A, ARA5, RA-5, ARA-5, LOC_Os02g43690

Description : GTP-binding protein YPTM2 OS=Zea mays (sp|q05737|yptm2_maize : 228.0)


Gene families : OG0001129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001129_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g43690.3

Target Alias Description ECC score Gene Family Method Actions
Adi_g021227 ATRAB1B, RABD2A,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g105164 RAB1C, ATRAB1C, ATRABD2C D-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12826 ATRAB1A, ATRABD2B, RAB1A D-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62085.t1 ATRAB1B, RABD2A,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0027.g023703 ATRAB1A, ATRABD2B, RAB1A D-class RAB GTPase & original description: CDS=1-693 0.03 OrthoFinder output from all 47 species
Azfi_s0488.g073508 ATRAB1B, RABD2A,... D-class RAB GTPase & original description: CDS=136-744 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000455.18 RAB1C, ATRAB1C, ATRABD2C Ras-related protein RABD2c OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001408.10 RAB1C, ATRAB1C, ATRABD2C Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
MA_101924g0020 ATRAB1B, RABD2A,... D-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Mp2g23010.1 ATRAB1B, RABD2A,... D-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Mp3g00710.1 ATRAB1A, ATRABD2B, RAB1A D-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Nbi_g15130 ATRAB1A, ATRABD2B, RAB1A D-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14298 ATRAB1B, RABD2A,... D-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010839 ATRAB1B, RABD2A,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.04 OrthoFinder output from all 47 species
Solyc05g053940.3.1 ATRAB1B, RABD2A,... D-class RAB GTPase 0.06 OrthoFinder output from all 47 species
Zm00001e015303_P001 ATRAB1B, RABD2A,... D-class RAB GTPase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 25 112
No external refs found!