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  5. LOC_Os02g43300.1

LOC_Os02g43300.1 (AT-GT2, GT2, LOC_Os02g43300)


Aliases : AT-GT2, GT2, LOC_Os02g43300

Description : transcription factor (Trihelix)


Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g43300.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00088210 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.Trihelix... 0.02 OrthoFinder output from all 47 species
Als_g53035 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0531.g075823 AT-GT2, GT2 Trihelix-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g08402 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g36900 AT-GTL1, GTL1, AT-GTL2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g39560 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04858 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08613 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24833 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g19944 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06995 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g08779 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g27535 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48438 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007383_P001 Zm00001e007383 transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!