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  5. LOC_Os02g42940.1

LOC_Os02g42940.1 (PVA12, LOC_Os02g42940)


Aliases : PVA12, LOC_Os02g42940

Description : contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface


Gene families : OG0000655 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g42940.1

Target Alias Description ECC score Gene Family Method Actions
Ppi_g12280 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021931 PVA12 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s2023.g028239 No alias contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Zm00001e015243_P002 PVA12, Zm00001e015243 contact site protein (VAP27) of... 0.07 OrthoFinder output from all 47 species
Zm00001e018705_P003 VAP27-2, Zm00001e018705 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000535 MSP_dom 43 146
No external refs found!