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  5. LOC_Os02g41460.1

LOC_Os02g41460.1 (LSH4, LOC_Os02g41460)


Aliases : LSH4, LOC_Os02g41460

Description : Protein G1-like3 OS=Oryza sativa subsp. indica (sp|b8ah02|g1l3_orysi : 252.0)


Gene families : OG0001118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001118_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g41460.1
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00153p00047660 evm_27.TU.AmTr_v1... Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6... 0.04 OrthoFinder output from all 47 species
AT2G42610 LSH10 Protein of unknown function (DUF640) 0.03 OrthoFinder output from all 47 species
AT3G04510 LSH2 Protein of unknown function (DUF640) 0.04 OrthoFinder output from all 47 species
AT3G23290 LSH4 No description available 0.07 OrthoFinder output from all 47 species
AT4G18610 LSH9 Protein of unknown function (DUF640) 0.03 OrthoFinder output from all 47 species
AT5G28490 LSH1 Protein of unknown function (DUF640) 0.05 OrthoFinder output from all 47 species
Ceric.02G086500.1 LSH4, Ceric.02G086500 plant-specific ALOG-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.14G090800.1 LSH6, Ceric.14G090800 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.29G008000.1 LSH4, Ceric.29G008000 plant-specific ALOG-type transcription factor & original... 0.07 OrthoFinder output from all 47 species
Dac_g44523 LSH4 plant-specific ALOG-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01023521001 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4... 0.03 OrthoFinder output from all 47 species
GSVIVT01024677001 LSH6 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6... 0.03 OrthoFinder output from all 47 species
GSVIVT01027827001 LSH10 No description available 0.04 OrthoFinder output from all 47 species
MA_12926g0010 LSH4 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.03 OrthoFinder output from all 47 species
Msp_g25188 LSH6 plant-specific ALOG-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g12268 LSH6 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0149.g023275 LSH4 plant-specific ALOG-type transcription factor & original... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0158.g023794 LSH4 plant-specific ALOG-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Solyc06g082210.1.1 LSH6, Solyc06g082210 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6... 0.04 OrthoFinder output from all 47 species
Solyc07g062470.4.1 LSH10, Solyc07g062470 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.02 OrthoFinder output from all 47 species
Solyc07g150147.1.1 LSH10, Solyc07g150147 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.02 OrthoFinder output from all 47 species
Solyc09g025280.1.1 LSH4, Solyc09g025280 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.04 OrthoFinder output from all 47 species
Solyc10g007310.1.1 LSH10, Solyc10g007310 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.04 OrthoFinder output from all 47 species
Solyc12g014260.1.1 LSH10, Solyc12g014260 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.02 OrthoFinder output from all 47 species
Spa_g07735 LSH4 plant-specific ALOG-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g22798 LSH4 plant-specific ALOG-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g28138 LSH4 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g47479 LSH4 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e004570_P001 LSH4, Zm00001e004570 Protein G1-like4 OS=Oryza sativa subsp. indica... 0.06 OrthoFinder output from all 47 species
Zm00001e012687_P001 LSH4, Zm00001e012687 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.04 OrthoFinder output from all 47 species
Zm00001e015143_P001 LSH4, Zm00001e015143 Protein G1-like3 OS=Oryza sativa subsp. indica... 0.05 OrthoFinder output from all 47 species
Zm00001e016177_P002 LSH4, Zm00001e016177 Protein G1-like6 OS=Oryza sativa subsp. indica... 0.03 OrthoFinder output from all 47 species
Zm00001e019403_P001 LSH6, Zm00001e019403 Protein G1-like7 OS=Oryza sativa subsp. indica... 0.04 OrthoFinder output from all 47 species
Zm00001e023022_P001 LSH4, Zm00001e023022 Protein G1-like3 OS=Oryza sativa subsp. indica... 0.03 OrthoFinder output from all 47 species
Zm00001e023639_P001 LSH4, Zm00001e023639 Protein G1-like6 OS=Oryza sativa subsp. indica... 0.03 OrthoFinder output from all 47 species
Zm00001e027283_P001 LSH6, Zm00001e027283 Protein G1-like8 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Zm00001e032784_P001 LSH6, Zm00001e032784 Protein G1 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Zm00001e037775_P001 LSH4, Zm00001e037775 Protein G1-like2 OS=Oryza sativa subsp. indica... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR006936 ALOG_dom 43 163
No external refs found!