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  5. LOC_Os02g40510.1

LOC_Os02g40510.1 (APRR1, AtTOC1, TOC1,...)


Aliases : APRR1, AtTOC1, TOC1, PRR1, LOC_Os02g40510

Description : circadian clock evening oscillator component TOC1 of circadian clock


Gene families : OG0002425 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002425_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g40510.1
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT5G61380 APRR1, AtTOC1, TOC1, PRR1 CCT motif -containing response regulator protein 0.1 OrthoFinder output from all 47 species
Adi_g116998 APRR9, TL1, PRR9 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0048.g030455 APRR1, AtTOC1, TOC1, PRR1 circadian clock evening oscillator component *(TOC1) of... 0.05 OrthoFinder output from all 47 species
Azfi_s0237.g059603 APRR1, AtTOC1, TOC1, PRR1 circadian clock evening oscillator component *(TOC1) of... 0.04 OrthoFinder output from all 47 species
Cba_g07670 APRR1, AtTOC1, TOC1, PRR1 circadian clock evening oscillator component *(TOC1) of... 0.02 OrthoFinder output from all 47 species
Ceric.05G086900.1 APRR1, AtTOC1,... circadian clock evening oscillator component *(TOC1) of... 0.05 OrthoFinder output from all 47 species
Ceric.08G065800.1 APRR1, AtTOC1,... circadian clock evening oscillator component *(TOC1) of... 0.07 OrthoFinder output from all 47 species
Ceric.26G022500.1 APRR1, AtTOC1,... circadian clock evening oscillator component *(TOC1) of... 0.04 OrthoFinder output from all 47 species
Ppi_g07546 APRR1, AtTOC1, TOC1, PRR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g115770.3.1 APRR1, AtTOC1,... circadian clock evening oscillator component TOC1 of... 0.03 OrthoFinder output from all 47 species
Spa_g50544 APRR1, AtTOC1, TOC1, PRR1 circadian clock evening oscillator component *(TOC1) of... 0.03 OrthoFinder output from all 47 species
Zm00001e015122_P001 APRR1, AtTOC1,... circadian clock evening oscillator component TOC1 of... 0.15 OrthoFinder output from all 47 species
Zm00001e022997_P002 APRR1, AtTOC1,... circadian clock evening oscillator component TOC1 of... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010402 CCT_domain 443 485
IPR001789 Sig_transdc_resp-reg_receiver 30 141
No external refs found!