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  5. LOC_Os02g40490.1

LOC_Os02g40490.1 (LOC_Os02g40490)


Aliases : LOC_Os02g40490

Description : no hits & (original description: none)


Gene families : OG0005352 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005352_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g40490.1
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AT5G40080 No alias Mitochondrial ribosomal protein L27 0.07 OrthoFinder output from all 47 species
Aspi01Gene50600.t1 Aspi01Gene50600 component *(mL41) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Cba_g69835 No alias component *(mL41) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020927.47 No alias No description available 0.03 OrthoFinder output from all 47 species
Cre06.g291300 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01009082001 No alias No description available 0.05 OrthoFinder output from all 47 species
Mp5g13150.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e011688_P001 Zm00001e011688 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR019189 Ribosomal_L27/L41_mit 73 136
No external refs found!