LOC_Os02g40430.1 (ATCLASP, CLASP, LOC_Os02g40430)


Aliases : ATCLASP, CLASP, LOC_Os02g40430

Description : microtubule orientation regulator (CLASP)


Gene families : OG0001377 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001377_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g40430.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g21161 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.03 OrthoFinder output from all 47 species
Als_g32923 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.02 OrthoFinder output from all 47 species
Aop_g05574 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene00539.t1 ATCLASP, CLASP,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0056.g034063 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g08319 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g16962 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.03 OrthoFinder output from all 47 species
Dde_g10526 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g02973 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g08680 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01028493001 ATCLASP, CLASP Cell cycle.cytokinesis.preprophase microtubule... 0.03 OrthoFinder output from all 47 species
GSVIVT01028494001 ATCLASP, CLASP CLIP-associated protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_32968 ATCLASP, CLASP microtubule orientation regulator (CLASP) 0.03 OrthoFinder output from all 47 species
Len_g12938 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.02 OrthoFinder output from all 47 species
Len_g51120 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g05041 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.04 OrthoFinder output from all 47 species
MA_33941g0010 ATCLASP, CLASP CLIP-associated protein OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
MA_33941g0020 ATCLASP, CLASP microtubule orientation regulator (CLASP) 0.06 OrthoFinder output from all 47 species
MA_7026974g0010 ATCLASP, CLASP CLIP-associated protein OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_7498912g0010 ATCLASP, CLASP CLIP-associated protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp4g01070.1 ATCLASP, CLASP microtubule orientation regulator (CLASP) 0.06 OrthoFinder output from all 47 species
Nbi_g05012 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.04 OrthoFinder output from all 47 species
Ore_g16654 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.03 OrthoFinder output from all 47 species
Ore_g35747 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.06 OrthoFinder output from all 47 species
Ppi_g05351 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.02 OrthoFinder output from all 47 species
Sam_g09001 No alias microtubule orientation regulator *(CLASP) & original... 0.03 OrthoFinder output from all 47 species
Smo234917 ATCLASP, CLASP CLIP-associated protein OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc06g008040.3.1 ATCLASP, CLASP,... microtubule orientation regulator (CLASP) 0.02 OrthoFinder output from all 47 species
Spa_g49738 ATCLASP, CLASP not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49739 ATCLASP, CLASP not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007629_P001 ATCLASP, CLASP,... microtubule orientation regulator (CLASP) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR024395 CLASP_N_dom 539 730
IPR024395 CLASP_N_dom 108 236
No external refs found!