LOC_Os02g39870.1 (EMB1241, LOC_Os02g39870)


Aliases : EMB1241, LOC_Os02g39870

Description : nucleotide exchange factor (CGE)


Gene families : OG0003073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003073_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g39870.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00119p00133730 EMB1241,... No description available 0.04 OrthoFinder output from all 47 species
AT5G17710 EMB1241 Co-chaperone GrpE family protein 0.08 OrthoFinder output from all 47 species
Adi_g105047 EMB1241 nucleotide exchange factor *(CGE) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g26465 EMB1241 nucleotide exchange factor *(CGE) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23855 EMB1241 nucleotide exchange factor *(CGE) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29275 EMB1241 nucleotide exchange factor *(CGE) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0090.g042634 EMB1241 nucleotide exchange factor *(CGE) & original... 0.03 OrthoFinder output from all 47 species
Ceric.35G059900.1 EMB1241, Ceric.35G059900 nucleotide exchange factor *(CGE) & original... 0.04 OrthoFinder output from all 47 species
Cre07.g341600 EMB1241 No description available 0.04 OrthoFinder output from all 47 species
Ehy_g03492 EMB1241 nucleotide exchange factor *(CGE) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008951001 No alias No description available 0.05 OrthoFinder output from all 47 species
Lfl_g01090 EMB1241 nucleotide exchange factor *(CGE) & original description: none 0.04 OrthoFinder output from all 47 species
Mp4g18970.1 EMB1241 nucleotide exchange factor (CGE) 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0163.g024029 EMB1241 nucleotide exchange factor *(CGE) & original... 0.05 OrthoFinder output from all 47 species
Sam_g06805 No alias nucleotide exchange factor *(CGE) & original description: none 0.03 OrthoFinder output from all 47 species
Smo83859 EMB1241 No description available 0.06 OrthoFinder output from all 47 species
Solyc10g081240.3.1 EMB1241, Solyc10g081240 nucleotide exchange factor (CGE) 0.07 OrthoFinder output from all 47 species
Spa_g06560 EMB1241 nucleotide exchange factor *(CGE) & original description: none 0.14 OrthoFinder output from all 47 species
Spa_g24979 EMB1241 nucleotide exchange factor *(CGE) & original description: none 0.17 OrthoFinder output from all 47 species
Tin_g19032 EMB1241 nucleotide exchange factor *(CGE) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008098_P001 Zm00001e008098 nucleotide exchange factor (CGE) 0.04 OrthoFinder output from all 47 species
Zm00001e015084_P001 EMB1241, Zm00001e015084 nucleotide exchange factor (CGE) 0.09 OrthoFinder output from all 47 species
Zm00001e022956_P001 EMB1241, Zm00001e022956 nucleotide exchange factor (CGE) 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEA Interproscan
BP GO:0006457 protein folding IEA Interproscan
MF GO:0042803 protein homodimerization activity IEA Interproscan
MF GO:0051087 chaperone binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
InterPro domains Description Start Stop
IPR000740 GrpE 138 293
No external refs found!