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  5. LOC_Os02g39840.1

LOC_Os02g39840.1 (eIFiso4G1, LOC_Os02g39840)


Aliases : eIFiso4G1, LOC_Os02g39840

Description : component eIF-iso4G of eIF-iso4F unwinding complex


Gene families : OG0001378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001378_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g39840.1

Target Alias Description ECC score Gene Family Method Actions
AT5G57870 eIFiso4G1 MIF4G domain-containing protein / MA3 domain-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g003745 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g021572 eIFiso4G2 component *(eIF-iso4G) of eIF-iso4F unwinding complex &... 0.02 OrthoFinder output from all 47 species
Adi_g045620 eIFiso4G2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058369 eIFiso4G1 component *(eIF-iso4G) of eIF-iso4F unwinding complex &... 0.03 OrthoFinder output from all 47 species
Aev_g28874 eIFiso4G1 component *(eIF-iso4G) of eIF-iso4F unwinding complex &... 0.03 OrthoFinder output from all 47 species
Cba_g15856 eIFiso4G1 component *(eIF-iso4G) of eIF-iso4F unwinding complex &... 0.02 OrthoFinder output from all 47 species
Ceric.09G008000.1 eIFiso4G1,... component *(eIF-iso4G) of eIF-iso4F unwinding complex &... 0.03 OrthoFinder output from all 47 species
Dac_g17079 eIFiso4G1 component *(eIF-iso4G) of eIF-iso4F unwinding complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g24667 eIFiso4G1 component *(eIF-iso4G) of eIF-iso4F unwinding complex &... 0.02 OrthoFinder output from all 47 species
Gb_20402 eIFiso4G1 Eukaryotic translation initiation factor isoform 4G-1... 0.02 OrthoFinder output from all 47 species
Lfl_g16451 eIFiso4G2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17548 eIFiso4G2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09060 No alias component *(eIF-iso4G) of eIF-iso4F unwinding complex &... 0.02 OrthoFinder output from all 47 species
Smo437322 eIFiso4G1 Protein biosynthesis.translation initiation.mRNA... 0.02 OrthoFinder output from all 47 species
Spa_g16864 eIFiso4G1 component *(eIF-iso4G) of eIF-iso4F unwinding complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e007677_P001 eIFiso4G1, Zm00001e007677 component eIF-iso4G of eIF-iso4F unwinding complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0033045 regulation of sister chromatid segregation IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0051983 regulation of chromosome segregation IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR003890 MIF4G-like_typ-3 208 432
IPR003891 Initiation_fac_eIF4g_MI 613 724
No external refs found!