- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : LOC_Os02g39550
Description : no hits & (original description: none)
Gene families : OG0002125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002125_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os02g39550.1 | |
| Cluster | HCCA: Cluster_65 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G65540 | No alias | LETM1-like protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G59820 | No alias | LETM1-like protein | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g18832 | No alias | ribosome docking factor *(MDM38) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s2240.g109970 | No alias | ribosome docking factor *(MDM38) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g07319 | No alias | ribosome docking factor *(MDM38) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g10876 | No alias | ribosome docking factor *(MDM38) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g03092 | No alias | ribosome docking factor *(MDM38) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g01371 | No alias | ribosome docking factor *(MDM38) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g28059 | No alias | ribosome docking factor *(MDM38) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g02254 | No alias | ribosome docking factor *(MDM38) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10428337g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g02092 | No alias | ribosome docking factor *(MDM38) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g13833 | No alias | ribosome docking factor *(MDM38) & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003909 | DNA ligase activity | IEP | HCCA |
| MF | GO:0003910 | DNA ligase (ATP) activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006310 | DNA recombination | IEP | HCCA |
| MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |