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  5. LOC_Os02g39360.1

LOC_Os02g39360.1 (STH, LOC_Os02g39360)


Aliases : STH, LOC_Os02g39360

Description : transcription factor (BBX-DBB)


Gene families : OG0000403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000403_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g39360.1
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00182p00043350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AT1G06040 STO B-box zinc finger family protein 0.02 OrthoFinder output from all 47 species
AT2G21320 No alias B-box zinc finger family protein 0.02 OrthoFinder output from all 47 species
AT2G31380 STH salt tolerance homologue 0.04 OrthoFinder output from all 47 species
AT4G38960 No alias B-box type zinc finger family protein 0.03 OrthoFinder output from all 47 species
Adi_g001540 STH not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g017902 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057497 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115013 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13138 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14676 STO BBX class-IV transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g28425 No alias BBX class-IV transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g06573 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08244 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11974 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g15657 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08389.t1 LZF1, STH3,... BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009705 No alias BBX class-IV transcription factor & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0185.g056620 STO BBX class-IV transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g01876 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G021600.1 Ceric.11G021600 BBX class-IV transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.17G005800.1 STO, Ceric.17G005800 BBX class-IV transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g37029 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26676 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01024173001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
Gb_39727 STH transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
Len_g48954 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g59223 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp8g01190.1 STO transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species
Msp_g21663 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07627 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28592 STO BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g39232 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g19854 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g65956 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g03820 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo102790 ATCOL4, COL4 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
Solyc01g110370.4.1 Solyc01g110370 transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
Solyc02g084420.3.1 Solyc02g084420 transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species
Spa_g29582 STH BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09563 STO BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007720_P001 STO, Zm00001e007720 transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
Zm00001e016532_P001 LZF1, STH3,... transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species
Zm00001e022915_P001 STO, Zm00001e022915 transcription factor (BBX-DBB) 0.06 OrthoFinder output from all 47 species
Zm00001e031265_P001 LZF1, STH3,... transcription factor (BBX-DBB) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008374 O-acyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR000315 Znf_B-box 54 95
IPR000315 Znf_B-box 4 47
No external refs found!