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  5. LOC_Os02g38760.1

LOC_Os02g38760.1 (LOC_Os02g38760)


Aliases : LOC_Os02g38760

Description : no hits & (original description: none)


Gene families : OG0009546 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009546_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g38760.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g38740.1 LOC_Os02g38740 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g04440.1 LOC_Os06g04440 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g21660.1 LOC_Os09g21660 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR022146 DUF3678 403 435
IPR022146 DUF3678 317 351
IPR005174 DUF295 267 306
No external refs found!