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  5. LOC_Os02g38250.1

LOC_Os02g38250.1 (emb1745, LOC_Os02g38250)


Aliases : emb1745, LOC_Os02g38250

Description : GLE1 scaffold nucleoporin of nuclear pore complex


Gene families : OG0004887 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004887_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g38250.1

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0371.g067123 emb1745 regulatory protein *(GLE1) of LOS4 helicase & original... 0.02 OrthoFinder output from all 47 species
Ehy_g14210 emb1745 regulatory protein *(GLE1) of LOS4 helicase & original... 0.03 OrthoFinder output from all 47 species
Spa_g07060 emb1745 regulatory protein *(GLE1) of LOS4 helicase & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA Interproscan
BP GO:0016973 poly(A)+ mRNA export from nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR012476 GLE1 329 560
No external refs found!