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  5. LOC_Os02g36740.1

LOC_Os02g36740.1 (LOC_Os02g36740)


Aliases : LOC_Os02g36740

Description : RING-v-class E3 ligase


Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g36740.1

Target Alias Description ECC score Gene Family Method Actions
AT2G02960 No alias RING/FYVE/PHD zinc finger superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G62460 No alias RING/FYVE/PHD zinc finger superfamily protein 0.04 OrthoFinder output from all 47 species
Als_g01768 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s1957.g108376 No alias E3 ubiquitin ligase & original description: CDS=1-984 0.04 OrthoFinder output from all 47 species
Cba_g36108 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G099300.1 Ceric.03G099300 E3 ubiquitin ligase & original description:... 0.05 OrthoFinder output from all 47 species
Cre17.g747747 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g17057 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g21743 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59358 No alias E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g08250 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427291g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g12114 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07989 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09226 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009834_P004 Zm00001e009834 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e021220_P001 Zm00001e021220 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 32 77
IPR022143 DUF3675 83 201
No external refs found!